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ykvQ [2018-10-11 18:10:29]
Genomic Context
categories
[category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other][category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]Gene
Coordinates
1,445,638 → 1,446,336
The protein
Protein family
glycosyl hydrolase 18 family (according to Swiss-Prot)[SW|Domains]
[SW|glycoside hydrolase family 18 domain ] (aa 25 to 220)Expression and Regulation
Operons
genes
[gene|FC4C5377EF1D794DCB19D0A8AFE958B84BD9C8BE|ykvP]-[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]-[gene|BC8CBFF0C2F3C2BEE3275E2CB65D41F2AFC0A1CD|ykvQ]-[gene|4FDAD5E5660EDB346A37C1F41BD8B7B66561E529|ykzR]
description
[Pubmed|11011148,22383849]
sigma factors
[protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|11011148,15699190], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]regulation
expressed late during sporulation in the mother cell ([protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]) [Pubmed|11011148,15699190]view in new tabBiological materials
Mutant
MGNA-A793 (ykvQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/793 NBRP B. subtilis, Japan]BKE13790 (Δ[gene|BC8CBFF0C2F3C2BEE3275E2CB65D41F2AFC0A1CD|ykvQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTCATAACCCCTTCATC, downstream forward: _UP4_TCTCAAGCCATTCCCCTTTABKK13790 (Δ[gene|BC8CBFF0C2F3C2BEE3275E2CB65D41F2AFC0A1CD|ykvQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTCATAACCCCTTCATC, downstream forward: _UP4_TCTCAAGCCATTCCCCTTTAReferences
